Syntenic regions and homologous genes identification with SynMap (CoGe) workflow
Summary
Name | Syntenic regions and homologous genes identification with SynMap (CoGe) workflow |
---|---|
Description | SynMapGenerates a syntenic dotplot between two organisms and identifies syntenic regions. SynMap is a web-based tool which allows researchers to explore whole genome synteny patterns across two genomes. The software finds putative genes or regions of homology between two genomes, identifies collinear sets of genes or regions of sequence similarity to infer synteny and generates a dotplot of the results and coloring syntenic pairs. [source : omictools] More informations : https://genomevolution.org/wiki/index.php/SynMap SynMap Methods :
Sources (scripts) : https://github.com/LyonsLab/coge/tree/master/scripts/synmap |
Program, Pipeline, Workflow or Method Name | SynMap |
Program Version | CoGe v7 |
Algorithm | |
Date Performed | Tuesday, January 15, 2019 |
Data Source |